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Rapporter Rapid detection of gastrointestinal pathogens in water using the FilmArray® system
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Articles Complete genome sequences of six Legionella pneumophila isolates from two collocated outbreaks of legionnaires' disease in 2005 and 2008 in Sarpsborg/Fredrikstad, Norway
Dybwad, Marius; Aarskaug, Tone; Fykse, Else-Marie; Madslien, Elisabeth Henie; Blatny, Janet Martha. Complete genome sequences of six Legionella pneumophila isolates from two collocated outbreaks of legionnaires' disease in 2005 and 2008 in Sarpsborg/Fredrikstad, Norway. Genome Announcements 2016 ;Volum 4.(6)
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Articles Microbial community structure in a full-scale anaerobic treatment plant during start-up and first year of operation revealed by high-throughput 16S rRNA gene amplicon sequencing
High-throughput amplicon sequencing of six biomass samples from a full-scale anaerobic reactor at a Norwegian wood and pulp factory using Biothane Biobed Expanded Granular Sludge Bed (EGSB) technology during start-up and first year of operation was performed. A total of 106,166 16S rRNA gene sequences (V3–V5 region) were obtained. The number of operational taxonomic units (OTUs) ranged from 595 to 2472, and a total of 38 different phyla and 143 families were observed. The predominant phyla were Bacteroidetes, Chloroflexi, Firmicutes, Proteobacteria, and Spirochaetes. A more diverse microbial community was observed in the inoculum biomass coming from an Upflow Anaerobic Sludge Blanket (USAB) reactor, reflecting an adaptation of the inoculum diversity to the specific conditions of the new reactor. In addition, no taxa classified as obligate pathogens were identified and potentially opportunistic pathogens were absent or observed in low abundances. No Legionella bacteria were identified by traditional culture-based and molecular methods.
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Articles Detection of Legionella pneumophila in a biological treatment plant by co-cultivatiobn with Acanthamoeba castellanii
Fykse, Else-Marie; Aarskaug, Tone; Blatny, Janet Martha. Detection of Legionella pneumophila in a biological treatment plant by co-cultivatiobn with Acanthamoeba castellanii. Current Environmental Engineering 2014 ;Volum 1.(2) s. 91-99
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Rapporter Evaluering av RAZOR™-instrument for identifisering av biologiske trusselstoffer
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Articles Legionella and non-Legionella bacteria in a biological treatment plant
Fykse, Else-Marie; Aarskaug, Tone; Thrane, Ingjerd; Blatny, Janet Martha. Legionella and non-Legionella bacteria in a biological treatment plant. Canadian journal of microbiology (Print) 2013 ;Volum 59.(2) s. 102-109
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Rapporter FFIs deltakelse i SIBCRA-laboratorieøvelse for blandede prøver, november 2007 - februar 2008
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Articles Evaluation of a highly discriminating multiplex multi-locus variable-number of tandem-repeats (MLVA) analysis for Vibrio cholerae
Olsen, Jaran Strand; Aarskaug, Tone; Skogan, Gunnar; Fykse, Else-Marie; Ellingsen, Anette Bauer; Blatny, Janet Martha. Evaluation of a highly discriminating multiplex multi-locus variable-number of tandem-repeats (MLVA) analysis for Vibrio cholerae. Journal of Microbiological Methods 2009 ;Volum 78.(3) s. 271-285
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Rapporter Identification of biological threat agents in the environment and its challenge
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Rapporter Sampling and identification of Legionella spp. at Borregaard Ind. Ltd.
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